Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | EXX13_25205 | Not Available | Positive | 5124609 - 5125349 | 28220.6 |
| repb family plasmid replication initiator protein | EXX13_25210 | Not Available | Negative | 5125634 - 5126611 | 37317.0 |
| hypothetical protein | EXX13_25215 | Not Available | Negative | 5127020 - 5127316 | 11163.2 |
| d-serine ammonia-lyase | EXX13_25235 | Not Available | Negative | 5128103 - 5128896 | 28920.6 |
| laci family dna-binding transcriptional regulator | EXX13_25245 | Not Available | Positive | 5129363 - 5130358 | 36447.7 |
| is66 family transposase | EXX13_25600 | Not Available | Positive | 5173166 - 5173413 | 9175.86 |
| type i restriction endonuclease subunit r | EXX13_25605 | Not Available | Negative | 5173683 - 5176937 | 124620.0 |
| restriction endonuclease subunit s | EXX13_25610 | Not Available | Negative | 5177032 - 5178414 | 51833.4 |
| dna methyltransferase | EXX13_25615 | Not Available | Negative | 5178404 - 5180023 | 60632.0 |
| dna-binding protein | EXX13_25620 | Not Available | Negative | 5180360 - 5180998 | 24796.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





