Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | EXX13_25150 | Not Available | Negative | 5114991 - 5116178 | 43426.5 |
| is3 family transposase | EXX13_25160 | Not Available | Negative | 5117632 - 5118845 | 46264.1 |
| transposase | EXX13_25165 | Not Available | Positive | 5119005 - 5119187 | 7146.51 |
| hypothetical protein | EXX13_25170 | Not Available | Positive | 5119337 - 5119600 | 10185.7 |
| outer membrane protease | EXX13_25175 | Not Available | Negative | 5119967 - 5120356 | 14300.2 |
| omptin family outer membrane protease | EXX13_25180 | Not Available | Positive | 5120460 - 5121413 | 35635.3 |
| hypothetical protein | EXX13_25185 | Not Available | Negative | 5121503 - 5121787 | 11023.8 |
| nad-dependent epimerase/dehydratase family protein | EXX13_25190 | Not Available | Positive | 5121846 - 5122955 | 41024.3 |
| antimicrobial resistance protein mig-14 | EXX13_25195 | Not Available | Positive | 5123018 - 5123926 | 35303.9 |
| serine/threonine protein kinase | EXX13_25200 | Not Available | Positive | 5124300 - 5124488 | 7211.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





