Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | EXX13_00025 | Not Available | Positive | 2929 - 4077 | 41462.2 |
| amino acid permease | EXX13_00030 | Not Available | Positive | 4287 - 5717 | 52480.5 |
| pyruvate formate lyase 1-activating protein | EXX13_00040 | Not Available | Negative | 5927 - 6667 | 28205.9 |
| formate c-acetyltransferase | EXX13_00045 | Not Available | Negative | 6859 - 9141 | 85355.0 |
| formate transporter foca | EXX13_00050 | Not Available | Negative | 9196 - 10053 | 30992.6 |
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | EXX13_00055 | Not Available | Negative | 10459 - 12219 | 65640.9 |
| duf421 domain-containing protein | EXX13_00060 | Not Available | Positive | 12349 - 13041 | 26283.5 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | EXX13_00065 | Not Available | Positive | 13240 - 14328 | 39828.5 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | EXX13_00070 | Not Available | Positive | 14399 - 15682 | 46098.5 |
| metalloprotease | EXX13_00075 | Not Available | Positive | 15851 - 16615 | 26796.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





