Escherichia coli strain EC_11

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain EC_11 is a Gram-negative, rod-shaped bacterium that is a facultative anaerobe, thriving optimally at 37°C within a mesophilic temperature range. This strain exhibits mobility, attributed to the presence of flagella, and typically exists in pairs or singles. It is free-living but has a significant host-associated habitat, being found in various organisms including Homo sapiens, Gallus gallus, and Bos taurus, among others, indicating a broad ecological niche. EC_11 is known for its pathogenicity in humans, linked to a variety of health issues. The strain is notably associated with urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). Other health effects include peritonitis, diarrhea, and complications that may lead to renal failure or even abortion. The extensive list of diseases underscores the strain's potential impact on human health and highlights its role as a significant public health concern. Given its diverse range of hosts and the extensive array of health effects, E. coli strain EC_11 serves as a crucial example of how environmental and biological interactions can influence pathogenicity. Its presence in both human and animal hosts emphasizes the interconnectedness of ecosystems and the importance of monitoring such strains in the context of public health and disease prevention.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain EC_11

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain EC_11
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain EC_11


Gene Summary

Adenine Count

1403876 bp

Thymine Count

1403803 bp

Guanine Count

1425476 bp

Cytosine Count

1394297 bp

Genome Length

5627615 bp

Protein-coding Genes

5194 genes

Non-Coding Genes

281 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter substrate-binding proteinEXX13_03250Not AvailablePositive701290 - 70220732662.0
abc transporter permeaseEXX13_03255Not AvailablePositive702214 - 70337141224.3
abc transporter atp-binding proteinEXX13_03260Not AvailablePositive703364 - 70429034438.7
abc transporter permeaseEXX13_03265Not AvailablePositive704295 - 70502625557.2
protein yohoEXX13_03270Not AvailableNegative705007 - 7051143642.85
hth-type transcriptional regulator mlraEXX13_03275Not AvailableNegative705174 - 70590528073.8
two-component regulatory system sensor histidine kinase btssEXX13_03280Not AvailablePositive706127 - 70781262096.3
two-component system response regulator btsrEXX13_03285Not AvailablePositive707809 - 70852827401.4
duf1456 family proteinEXX13_03290Not AvailablePositive708575 - 70904518033.9
duf1307 domain-containing proteinEXX13_03295Not AvailableNegative709086 - 70954716595.0

Displaying genes 881 – 890 of 5475 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total