Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssk | EXX13_23790 | Not Available | Positive | 4886639 - 4887970 | 49914.7 |
| dotu family type iv/vi secretion system protein | EXX13_23795 | Not Available | Positive | 4887975 - 4888736 | 29390.8 |
| type vi secretion system-associated protein tago | EXX13_23805 | Not Available | Positive | 4891480 - 4892223 | 26435.7 |
| type vi secretion system protein tssa | EXX13_23810 | Not Available | Positive | 4892228 - 4893640 | 52237.9 |
| type vi secretion system membrane subunit tssm | EXX13_23815 | Not Available | Positive | 4893749 - 4897183 | 130812.0 |
| hypothetical protein | EXX13_23820 | Not Available | Positive | 4897194 - 4898543 | 50808.6 |
| hcp family type vi secretion system effector | EXX13_23825 | Not Available | Positive | 4898570 - 4899049 | 17910.2 |
| peptidoglycan-binding protein | EXX13_23835 | Not Available | Positive | 4899370 - 4899966 | 22562.1 |
| hypothetical protein | EXX13_23840 | Not Available | Positive | 4899969 - 4900418 | 17216.8 |
| hypothetical protein | EXX13_23845 | Not Available | Positive | 4900415 - 4900771 | 14056.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





