Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase, carboxyltransferase subunit beta | EXX13_22195 | Not Available | Negative | 4556982 - 4557896 | 33323.9 |
| deda family protein | EXX13_22200 | Not Available | Negative | 4558052 - 4558711 | 24662.8 |
| trna pseudouridine(38-40) synthase trua | EXX13_22205 | Not Available | Negative | 4558794 - 4559606 | 30414.2 |
| aspartate-semialdehyde dehydrogenase | EXX13_22210 | Not Available | Negative | 4559606 - 4560619 | 36338.1 |
| 4-phosphoerythronate dehydrogenase pdxb | EXX13_22215 | Not Available | Negative | 4560685 - 4561821 | 41349.0 |
| flagella biosynthesis regulator flk | EXX13_22220 | Not Available | Positive | 4561920 - 4562915 | 36670.5 |
| arabinose transporter | EXX13_22225 | Not Available | Negative | 4562912 - 4564090 | 40495.8 |
| beta-ketoacyl-acp synthase i | EXX13_22230 | Not Available | Negative | 4564399 - 4565619 | 42615.9 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | EXX13_22235 | Not Available | Positive | 4565778 - 4567784 | 74581.4 |
| yfcl family protein | EXX13_22240 | Not Available | Negative | 4567905 - 4568183 | 10000.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





