Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h:quinone oxidoreductase | EXX13_21630 | Not Available | Negative | 4456740 - 4457600 | 29855.3 |
| transcriptional regulator | EXX13_21635 | Not Available | Positive | 4457689 - 4458069 | 14094.0 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase | EXX13_21640 | Not Available | Negative | 4458187 - 4460130 | 70835.9 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | EXX13_21645 | Not Available | Positive | 4460320 - 4461060 | 27191.4 |
| hypothetical protein | EXX13_21650 | Not Available | Positive | 4461272 - 4462183 | 34768.3 |
| ytfj family protein | EXX13_21655 | Not Available | Negative | 4462273 - 4462827 | 20464.7 |
| duf1107 domain-containing protein | EXX13_21660 | Not Available | Positive | 4463152 - 4463358 | 8072.24 |
| hlyc/corc family transporter | EXX13_21665 | Not Available | Negative | 4463437 - 4464780 | 49765.6 |
| peptide-methionine (s)-s-oxide reductase msra | EXX13_21670 | Not Available | Negative | 4465103 - 4465741 | 23316.3 |
| autotransporter assembly complex protein tama | EXX13_21675 | Not Available | Positive | 4465947 - 4467680 | 64799.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





