Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease viii | EXX13_21380 | Not Available | Positive | 4408326 - 4409117 | 29812.8 |
| abrb family transcriptional regulator | EXX13_21385 | Not Available | Negative | 4409114 - 4410160 | 36886.1 |
| type 1 fimbrial protein | EXX13_21390 | Not Available | Negative | 4410309 - 4411370 | 39665.9 |
| molecular chaperone | EXX13_21395 | Not Available | Negative | 4411367 - 4412098 | 27516.3 |
| fimbrial biogenesis outer membrane usher protein | EXX13_21400 | Not Available | Negative | 4412113 - 4414563 | 90134.2 |
| type 1 fimbrial protein | EXX13_21405 | Not Available | Negative | 4414622 - 4415188 | 19960.5 |
| citrate (si)-synthase | EXX13_21410 | Not Available | Negative | 4415575 - 4416858 | 47984.6 |
| hypothetical protein | EXX13_21415 | Not Available | Negative | 4417064 - 4417171 | 3827.66 |
| succinate dehydrogenase cytochrome b556 subunit | EXX13_21420 | Not Available | Positive | 4417567 - 4417956 | 14300.0 |
| succinate dehydrogenase membrane anchor subunit | EXX13_21425 | Not Available | Positive | 4417950 - 4418297 | 12868.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





