Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspf | EXX13_20580 | Not Available | Positive | 4259945 - 4261168 | 44891.7 |
| type ii secretion system protein gspg | EXX13_20585 | Not Available | Positive | 4261185 - 4261640 | 16647.8 |
| type ii secretion system protein gsph | EXX13_20590 | Not Available | Positive | 4261644 - 4262207 | 21237.8 |
| type ii secretion system protein gspi | EXX13_20595 | Not Available | Positive | 4262204 - 4262575 | 13600.2 |
| type ii secretion system protein gspj | EXX13_20600 | Not Available | Positive | 4262572 - 4263177 | 22425.4 |
| general secretion pathway protein gspk | EXX13_20605 | Not Available | Positive | 4263174 - 4264151 | 36472.2 |
| type ii secretion system protein gspl | EXX13_20610 | Not Available | Positive | 4264148 - 4265326 | 44297.5 |
| type ii secretion system protein | EXX13_20615 | Not Available | Positive | 4265328 - 4265864 | 20427.8 |
| hypothetical protein | EXX13_20620 | Not Available | Positive | 4265960 - 4266139 | 6545.48 |
| type ii toxin-antitoxin system rele/pare family toxin | EXX13_20625 | Not Available | Negative | 4266279 - 4266605 | 12420.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





