Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l9 | EXX13_20365 | Not Available | Positive | 4213664 - 4214113 | 15770.0 |
| duf2686 family protein | EXX13_20370 | Not Available | Negative | 4214184 - 4214978 | 29678.0 |
| is200/is605 family transposase | EXX13_20380 | Not Available | Negative | 4215602 - 4215719 | 4242.99 |
| hydrogenase 2 small subunit | EXX13_20385 | Not Available | Positive | 4215720 - 4215865 | 4622.55 |
| hydrogenase 2 operon protein hyba | EXX13_20390 | Not Available | Positive | 4215868 - 4216854 | 36005.0 |
| ni/fe-hydrogenase cytochrome b subunit | EXX13_20395 | Not Available | Positive | 4216844 - 4218022 | 43604.7 |
| hydrogenase 2 large subunit | EXX13_20400 | Not Available | Positive | 4218019 - 4219722 | 62494.6 |
| hyad/hybd family hydrogenase maturation endopeptidase | EXX13_20405 | Not Available | Positive | 4219722 - 4220216 | 17712.8 |
| hydrogenase-2 assembly chaperone | EXX13_20410 | Not Available | Positive | 4220209 - 4220697 | 17994.7 |
| hydrogenase maturation nickel metallochaperone hypa | EXX13_20415 | Not Available | Positive | 4220690 - 4221031 | 12712.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





