Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1471 domain-containing protein | EXX13_17660 | Not Available | Positive | 3710098 - 3710358 | 8568.2 |
| malate/lactate/ureidoglycolate dehydrogenase | EXX13_17665 | Not Available | Negative | 3710587 - 3711672 | 38861.3 |
| dna-binding protein ybib | EXX13_17670 | Not Available | Negative | 3711813 - 3712775 | 35050.7 |
| atp-dependent dna helicase ding | EXX13_17675 | Not Available | Negative | 3712803 - 3714953 | 81435.8 |
| type iii effector | EXX13_17680 | Not Available | Negative | 3715237 - 3717249 | 76867.4 |
| atp-dependent rna helicase rhle | EXX13_17685 | Not Available | Negative | 3719344 - 3720708 | 50008.5 |
| dna-binding transcriptional regulator cecr | EXX13_17690 | Not Available | Positive | 3720937 - 3721608 | 25018.1 |
| secretion protein hlyd | EXX13_17695 | Not Available | Positive | 3721611 - 3722606 | 36287.7 |
| abc transporter atp-binding protein | EXX13_17700 | Not Available | Positive | 3722599 - 3724335 | 63163.3 |
| abc transporter permease | EXX13_17705 | Not Available | Positive | 3724328 - 3725461 | 42062.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





