Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein roda | EXX13_16855 | Not Available | Negative | 3544689 - 3545801 | 40478.6 |
| penicillin-binding protein 2 | EXX13_16860 | Not Available | Negative | 3545804 - 3547705 | 70860.6 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | EXX13_16865 | Not Available | Negative | 3547736 - 3548203 | 17342.1 |
| ribosome silencing factor | EXX13_16870 | Not Available | Negative | 3548207 - 3548524 | 11582.9 |
| adenosylcobalamin/alpha-ribazole phosphatase | EXX13_16875 | Not Available | Negative | 3548784 - 3549395 | 23386.8 |
| nicotinate-nucleotide adenylyltransferase | EXX13_16880 | Not Available | Negative | 3549419 - 3550060 | 24529.3 |
| dna polymerase iii subunit delta | EXX13_16885 | Not Available | Negative | 3550062 - 3551093 | 38702.0 |
| lps assembly lipoprotein lpte | EXX13_16890 | Not Available | Negative | 3551093 - 3551674 | 21357.8 |
| leucine--trna ligase | EXX13_16895 | Not Available | Negative | 3551689 - 3554271 | 97268.0 |
| zinc ribbon-containing protein | EXX13_16900 | Not Available | Positive | 3554507 - 3554989 | 18798.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





