Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein insertase yidc | EXX13_13560 | Not Available | Positive | 2850232 - 2851878 | 61529.4 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | EXX13_13565 | Not Available | Positive | 2851984 - 2853348 | 49215.7 |
| shet2/espl2 family type iii secretion system effector toxin | EXX13_13570 | Not Available | Negative | 2853487 - 2855649 | 81440.7 |
| tryptophanase leader peptide | EXX13_13575 | Not Available | Positive | 2856049 - 2856123 | 2894.56 |
| tryptophanase | EXX13_13580 | Not Available | Positive | 2856344 - 2857759 | 52776.4 |
| low affinity tryptophan permease tnab | EXX13_13585 | Not Available | Positive | 2857850 - 2859097 | 45227.3 |
| multidrug efflux mfs transporter mdtl | EXX13_13590 | Not Available | Positive | 2859229 - 2860404 | 41509.2 |
| hth-type transcriptional regulator yidz | EXX13_13595 | Not Available | Positive | 2860379 - 2861338 | 36833.8 |
| hypothetical protein | EXX13_13600 | Not Available | Positive | 2861495 - 2862244 | 27680.3 |
| nad(p)h-dependent chromate oxidoreductase yief | EXX13_13605 | Not Available | Positive | 2862266 - 2862832 | 20377.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





