Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii cell invasion protein sipb | EXX13_13310 | Not Available | Positive | 2788476 - 2790257 | 63967.3 |
| hypothetical protein | EXX13_13315 | Not Available | Positive | 2790270 - 2791421 | 43600.3 |
| ipad/sipd/sspd family type iii secretion system needle tip protein | EXX13_13320 | Not Available | Positive | 2791465 - 2792814 | 50117.0 |
| hila family transcriptional regulator eila | EXX13_13325 | Not Available | Positive | 2793017 - 2794714 | 63927.0 |
| inverse autotransporter beta-barrel domain-containing protein | EXX13_13330 | Not Available | Negative | 2794764 - 2805590 | 375755.0 |
| purine ribonucleoside efflux pump nepi | EXX13_13335 | Not Available | Negative | 2805792 - 2806976 | 41629.3 |
| hypothetical protein | EXX13_13340 | Not Available | Negative | 2807060 - 2807251 | 7294.13 |
| type ii toxin-antitoxin system rele/pare family toxin | EXX13_13345 | Not Available | Positive | 2807210 - 2807563 | 13430.1 |
| dna-binding transcriptional regulator | EXX13_13350 | Not Available | Positive | 2807547 - 2807870 | 11625.2 |
| duf1198 domain-containing protein | EXX13_13355 | Not Available | Negative | 2807986 - 2808438 | 17178.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





