Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (4s)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase | EXX13_13135 | Not Available | Negative | 2758584 - 2758874 | 11255.4 |
| 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | EXX13_13140 | Not Available | Negative | 2758898 - 2759773 | 31878.6 |
| autoinducer 2 abc transporter substrate-binding protein lsrb | EXX13_13145 | Not Available | Negative | 2759800 - 2760822 | 36668.8 |
| autoinducer 2 abc transporter permease lsrd | EXX13_13150 | Not Available | Negative | 2760834 - 2761826 | 34458.6 |
| autoinducer 2 abc transporter permease lsrc | EXX13_13155 | Not Available | Negative | 2761826 - 2762854 | 36431.1 |
| autoinducer 2 abc transporter atp-binding protein lsra | EXX13_13160 | Not Available | Negative | 2762848 - 2764383 | 55741.6 |
| transcriptional regulator lsrr | EXX13_13165 | Not Available | Positive | 2764632 - 2765585 | 33828.0 |
| autoinducer-2 kinase | EXX13_13170 | Not Available | Positive | 2765664 - 2767256 | 57562.0 |
| autotransporter outer membrane beta-barrel domain-containing protein | EXX13_13180 | Not Available | Positive | 2771811 - 2773208 | 50565.8 |
| type ii toxin-antitoxin system antitoxin hipb | EXX13_13185 | Not Available | Positive | 2773417 - 2773683 | 10047.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





