Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1161 domain-containing protein | EXX13_12935 | Not Available | Negative | 2721725 - 2722030 | 10491.3 |
| ynfc family lipoprotein | EXX13_12940 | Not Available | Positive | 2722138 - 2722848 | 26508.3 |
| spermidine n1-acetyltransferase | EXX13_12945 | Not Available | Negative | 2722851 - 2723411 | 21888.2 |
| duf1283 family protein | EXX13_12950 | Not Available | Negative | 2723446 - 2723787 | 12943.4 |
| ynfa family protein | EXX13_12955 | Not Available | Positive | 2723922 - 2724248 | 11920.2 |
| starvation-sensing protein rspa | EXX13_12960 | Not Available | Positive | 2724454 - 2725668 | 45971.0 |
| zn-dependent oxidoreductase | EXX13_12965 | Not Available | Positive | 2725680 - 2726699 | 36552.1 |
| mfs transporter | EXX13_12970 | Not Available | Positive | 2726757 - 2728124 | 49370.7 |
| mannitol dehydrogenase family protein | EXX13_12975 | Not Available | Positive | 2728213 - 2729673 | 53594.1 |
| putative selenium delivery protein ydfz | EXX13_12980 | Not Available | Negative | 2729709 - 2729912 | 7276.83 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





