Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1656 domain-containing protein | EXX13_12635 | Not Available | Negative | 2658794 - 2659030 | 8891.33 |
| transcriptional regulator slya | EXX13_12640 | Not Available | Positive | 2659231 - 2659665 | 16354.0 |
| outer membrane lipoprotein slyb | EXX13_12645 | Not Available | Negative | 2659712 - 2660179 | 15602.7 |
| anhydro-n-acetylmuramic acid kinase | EXX13_12650 | Not Available | Positive | 2660453 - 2661562 | 39526.7 |
| c-type lysozyme inhibitor | EXX13_12655 | Not Available | Positive | 2661660 - 2661989 | 12590.3 |
| pyridoxamine 5'-phosphate oxidase | EXX13_12660 | Not Available | Positive | 2662048 - 2662704 | 25546.6 |
| tyrosine--trna ligase | EXX13_12665 | Not Available | Positive | 2662833 - 2664107 | 47529.6 |
| pyridoxal kinase pdxy | EXX13_12670 | Not Available | Positive | 2664169 - 2665029 | 31192.8 |
| glutathione transferase gsta | EXX13_12675 | Not Available | Negative | 2665073 - 2665678 | 22869.6 |
| dipeptide/tripeptide permease dtpa | EXX13_12680 | Not Available | Negative | 2665784 - 2667286 | 54042.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





