Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-di-gmp phosphodiesterase pdec | EXX13_11695 | Not Available | Negative | 2479141 - 2480727 | 60834.8 |
| hypothetical protein | EXX13_11700 | Not Available | Positive | 2481157 - 2481438 | 10304.0 |
| single-stranded dna-binding protein ssb1 | EXX13_11705 | Not Available | Negative | 2481537 - 2482073 | 18976.1 |
| excinuclease abc subunit uvra | EXX13_11710 | Not Available | Positive | 2482327 - 2485149 | 103874.0 |
| mmcq/yjbr family dna-binding protein | EXX13_11715 | Not Available | Negative | 2485184 - 2485540 | 13520.2 |
| thiamine phosphate synthase | EXX13_11720 | Not Available | Negative | 2485544 - 2485960 | 15670.8 |
| class b acid phosphatase | EXX13_11725 | Not Available | Negative | 2486071 - 2486784 | 26104.9 |
| aromatic amino acid transaminase | EXX13_11735 | Not Available | Negative | 2487929 - 2489122 | 43493.2 |
| alanine racemase | EXX13_11740 | Not Available | Negative | 2489375 - 2490454 | 39197.3 |
| pp_02381 | EXX13_12065 | Not Available | Negative | 2532017 - 2532139 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





