Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c nitrite reductase pentaheme subunit | EXX13_11645 | Not Available | Negative | 2466387 - 2466953 | 20715.6 |
| ammonia-forming nitrite reductase cytochrome c552 subunit | EXX13_11650 | Not Available | Negative | 2466998 - 2468434 | 53679.7 |
| acetate--coa ligase | EXX13_11655 | Not Available | Positive | 2468827 - 2470785 | 72069.4 |
| duf485 domain-containing protein | EXX13_11660 | Not Available | Positive | 2470986 - 2471300 | 11672.3 |
| cation/acetate symporter actp | EXX13_11665 | Not Available | Positive | 2471297 - 2472946 | 59200.7 |
| pentapeptide repeat-containing protein | EXX13_11670 | Not Available | Positive | 2473124 - 2474416 | 49439.1 |
| na+/h+ antiporter | EXX13_11675 | Not Available | Negative | 2474570 - 2476219 | 60527.5 |
| ncs2 family permease | EXX13_11680 | Not Available | Negative | 2476370 - 2477719 | 45714.4 |
| redox-sensitive transcriptional activator soxr | EXX13_11685 | Not Available | Negative | 2478265 - 2478729 | 17150.7 |
| superoxide response transcriptional regulator soxs | EXX13_11690 | Not Available | Positive | 2478815 - 2479138 | 12911.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





