Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf957 domain-containing protein | EXX13_11295 | Not Available | Positive | 2390518 - 2390715 | 7395.72 |
| duf4942 domain-containing protein | EXX13_11300 | Not Available | Positive | 2390800 - 2391642 | 32347.0 |
| transcriptional regulator cadc | EXX13_11305 | Not Available | Positive | 2392391 - 2393929 | 57816.1 |
| hypothetical protein | EXX13_11310 | Not Available | Negative | 2393820 - 2394065 | 9324.27 |
| cadaverine/lysine antiporter | EXX13_11315 | Not Available | Positive | 2394295 - 2395629 | 46667.8 |
| lysine decarboxylase cada | EXX13_11320 | Not Available | Positive | 2395709 - 2397856 | 81264.7 |
| dipeptide/tripeptide permease dtpc | EXX13_11325 | Not Available | Positive | 2397915 - 2399372 | 53086.8 |
| lysine--trna ligase | EXX13_11330 | Not Available | Positive | 2399609 - 2401126 | 57829.9 |
| duf2566 domain-containing protein | EXX13_11335 | Not Available | Negative | 2401245 - 2401418 | 6569.47 |
| type v toxin-antitoxin system endoribonuclease antitoxin ghos | EXX13_11340 | Not Available | Negative | 2401446 - 2401742 | 11468.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





