Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protoheme ix farnesyltransferase | EXX13_09470 | Not Available | Positive | 2020134 - 2021024 | 32250.4 |
| mfs transporter | EXX13_09475 | Not Available | Positive | 2021173 - 2022537 | 48782.9 |
| yajq family cyclic di-gmp-binding protein | EXX13_09480 | Not Available | Negative | 2022665 - 2023156 | 18344.9 |
| 2-dehydropantoate 2-reductase | EXX13_09485 | Not Available | Positive | 2023324 - 2024235 | 33872.8 |
| protein deglycase yajl | EXX13_09490 | Not Available | Positive | 2024198 - 2024788 | 20867.3 |
| trna 4-thiouridine(8) synthase thii | EXX13_09495 | Not Available | Negative | 2024842 - 2026290 | 55051.4 |
| exodeoxyribonuclease vii small subunit | EXX13_09500 | Not Available | Positive | 2026496 - 2026738 | 8952.42 |
| (2e,6e)-farnesyl diphosphate synthase | EXX13_09505 | Not Available | Positive | 2026738 - 2027637 | 32161.5 |
| 1-deoxy-d-xylulose-5-phosphate synthase | EXX13_09510 | Not Available | Positive | 2027662 - 2029524 | 67606.9 |
| 1-deoxyxylulose-5-phosphate synthase yajo | EXX13_09515 | Not Available | Positive | 2029579 - 2030553 | 36421.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





