Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin-dependent thiol peroxidase | EXX13_08590 | Not Available | Negative | 1837175 - 1837645 | 17634.9 |
| glycine cleavage system transcriptional repressor | EXX13_08595 | Not Available | Negative | 1837645 - 1838217 | 20769.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | EXX13_08600 | Not Available | Positive | 1838363 - 1839241 | 31285.9 |
| outer membrane protein assembly factor bamc | EXX13_08605 | Not Available | Positive | 1839258 - 1840292 | 36844.5 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | EXX13_08610 | Not Available | Positive | 1840505 - 1841218 | 26996.5 |
| neutral zinc metallopeptidase | EXX13_08615 | Not Available | Positive | 1841386 - 1842249 | 31430.0 |
| trna(met) cytidine acetyltransferase | EXX13_08620 | Not Available | Positive | 1842264 - 1844279 | 74793.5 |
| esterase | EXX13_08625 | Not Available | Positive | 1844353 - 1845051 | 24801.4 |
| ypfn family protein | EXX13_08630 | Not Available | Negative | 1845132 - 1845332 | 8071.78 |
| succinyl-diaminopimelate desuccinylase | EXX13_08635 | Not Available | Negative | 1845360 - 1846487 | 41271.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





