Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component system sensor histidine kinase qsee/glrk | EXX13_08190 | Not Available | Positive | 1742067 - 1743494 | 53310.5 |
| two-component system qseef-associated lipoprotein qseg | EXX13_08195 | Not Available | Positive | 1743659 - 1744372 | 27292.3 |
| two-component system response regulator glrr | EXX13_08200 | Not Available | Positive | 1744362 - 1745696 | 49152.3 |
| nitrogen regulatory protein p-ii | EXX13_08205 | Not Available | Positive | 1745757 - 1746095 | 12426.2 |
| no-inducible flavohemoprotein | EXX13_08210 | Not Available | Negative | 1746140 - 1747330 | 43839.1 |
| serine hydroxymethyltransferase | EXX13_08215 | Not Available | Positive | 1747658 - 1748911 | 45319.2 |
| rok family protein | EXX13_08220 | Not Available | Negative | 1749109 - 1750302 | 44592.4 |
| duf5107 domain-containing protein | EXX13_08225 | Not Available | Positive | 1750420 - 1753701 | 123971.0 |
| sugar abc transporter substrate-binding protein | EXX13_08230 | Not Available | Positive | 1753798 - 1754781 | 35057.2 |
| sugar abc transporter atp-binding protein | EXX13_08235 | Not Available | Positive | 1754804 - 1756315 | 55011.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





