Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXX13_07480 | Not Available | Negative | 1592435 - 1592974 | 20568.6 |
| dna-binding transcriptional activator tdcr | EXX13_07485 | Not Available | Negative | 1593230 - 1593574 | 13553.3 |
| transcriptional regulator tdca | EXX13_07490 | Not Available | Positive | 1593763 - 1594701 | 34540.9 |
| bifunctional threonine ammonia-lyase/l-serine ammonia-lyase tdcb | EXX13_07495 | Not Available | Positive | 1594800 - 1595789 | 35234.5 |
| threonine/serine transporter tdcc | EXX13_07500 | Not Available | Positive | 1595811 - 1597142 | 48895.8 |
| propionate kinase | EXX13_07505 | Not Available | Positive | 1597168 - 1598376 | 43416.7 |
| 2-ketobutyrate formate-lyase/pyruvate formate-lyase | EXX13_07510 | Not Available | Positive | 1598410 - 1600704 | 85982.4 |
| enamine/imine deaminase | EXX13_07515 | Not Available | Positive | 1600718 - 1601107 | 14008.0 |
| l-serine ammonia-lyase | EXX13_07520 | Not Available | Positive | 1601179 - 1602543 | 48538.6 |
| haaap family serine/threonine permease | EXX13_07525 | Not Available | Positive | 1602818 - 1604149 | 48317.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





