Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon starvation induced protein csid | EXX13_06465 | Not Available | Negative | 1394928 - 1395905 | 37454.7 |
| hypothetical protein | EXX13_06470 | Not Available | Negative | 1396241 - 1398493 | 85223.1 |
| Trna-met | Not Available | Not Available | Positive | 1399053 - 1399128 | Not Available |
| hypothetical protein | EXX13_06480 | Not Available | Positive | 1399879 - 1401333 | 54844.4 |
| dna invertase | EXX13_06485 | Not Available | Positive | 1401720 - 1401929 | 7781.7 |
| atpase | EXX13_06490 | Not Available | Positive | 1402084 - 1402203 | 4328.2 |
| adhesin-like autotransporter ypja | EXX13_06495 | Not Available | Positive | 1402268 - 1406842 | 157496.0 |
| 30s ribosomal protein s16 | EXX13_06640 | Not Available | Positive | 1427514 - 1427762 | 9191.08 |
| ribosome maturation factor rimm | EXX13_06645 | Not Available | Positive | 1427781 - 1428329 | 20606.6 |
| trna (guanosine(37)-n1)-methyltransferase trmd | EXX13_06650 | Not Available | Positive | 1428360 - 1429127 | 28424.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





