Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase maturation carbamoyl dehydratase hype | EXX13_06115 | Not Available | Negative | 1331045 - 1332055 | 35112.6 |
| hydrogenase formation protein hypd | EXX13_06120 | Not Available | Negative | 1332052 - 1333173 | 41366.7 |
| hydrogenase 3 maturation protein hypc | EXX13_06125 | Not Available | Negative | 1333173 - 1333445 | 9732.58 |
| hydrogenase nickel incorporation protein hypb | EXX13_06130 | Not Available | Negative | 1333436 - 1334308 | 31570.8 |
| hydrogenase maturation nickel metallochaperone hypa | EXX13_06135 | Not Available | Negative | 1334312 - 1334662 | 13168.9 |
| hypothetical protein | EXX13_06140 | Not Available | Positive | 1334568 - 1334786 | 7965.7 |
| formate hydrogenlyase regulator hyca | EXX13_06145 | Not Available | Positive | 1334874 - 1335335 | 17642.0 |
| 4fe-4s dicluster domain-containing protein | EXX13_06150 | Not Available | Positive | 1335460 - 1336071 | 21874.4 |
| formate hydrogenlyase subunit 3 | EXX13_06155 | Not Available | Positive | 1336068 - 1337894 | 64127.2 |
| formate hydrogenlyase subunit hycd | EXX13_06160 | Not Available | Positive | 1337897 - 1338820 | 33031.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





