Escherichia coli strain EC_11

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain EC_11 is a Gram-negative, rod-shaped bacterium that is a facultative anaerobe, thriving optimally at 37°C within a mesophilic temperature range. This strain exhibits mobility, attributed to the presence of flagella, and typically exists in pairs or singles. It is free-living but has a significant host-associated habitat, being found in various organisms including Homo sapiens, Gallus gallus, and Bos taurus, among others, indicating a broad ecological niche. EC_11 is known for its pathogenicity in humans, linked to a variety of health issues. The strain is notably associated with urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). Other health effects include peritonitis, diarrhea, and complications that may lead to renal failure or even abortion. The extensive list of diseases underscores the strain's potential impact on human health and highlights its role as a significant public health concern. Given its diverse range of hosts and the extensive array of health effects, E. coli strain EC_11 serves as a crucial example of how environmental and biological interactions can influence pathogenicity. Its presence in both human and animal hosts emphasizes the interconnectedness of ecosystems and the importance of monitoring such strains in the context of public health and disease prevention.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain EC_11

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain EC_11
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain EC_11


Gene Summary

Adenine Count

1403876 bp

Thymine Count

1403803 bp

Guanine Count

1425476 bp

Cytosine Count

1394297 bp

Genome Length

5627615 bp

Protein-coding Genes

5194 genes

Non-Coding Genes

281 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sulfate adenylyltransferase subunit cysnEXX13_06015Not AvailablePositive1313051 - 131447852661.6
adenylyl-sulfate kinaseEXX13_06020Not AvailablePositive1314478 - 131508322322.7
duf3561 family proteinEXX13_06025Not AvailablePositive1315133 - 131545612050.0
cell division protein ftsbEXX13_06030Not AvailablePositive1315650 - 131596111622.7
2-c-methyl-d-erythritol 4-phosphate cytidylyltransferaseEXX13_06035Not AvailablePositive1315980 - 131669025738.7
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseEXX13_06040Not AvailablePositive1316690 - 131716916898.6
trna pseudouridine(13) synthase trudEXX13_06045Not AvailablePositive1317166 - 131821539078.7
5'/3'-nucleotidase sureEXX13_06050Not AvailablePositive1318196 - 131895726902.0
protein-l-isoaspartate o-methyltransferaseEXX13_06055Not AvailablePositive1318951 - 131957723259.2
murein hydrolase activator nlpdEXX13_06060Not AvailablePositive1319717 - 132085640151.3

Displaying genes 1421 – 1430 of 5475 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total