Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| effector protein | EXX13_05400 | Not Available | Positive | 1181219 - 1181788 | 22213.1 |
| yscq/hrcq family type iii secretion apparatus protein | EXX13_05405 | Not Available | Positive | 1181788 - 1182735 | 36347.5 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | EXX13_05410 | Not Available | Positive | 1182725 - 1183390 | 24526.4 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | EXX13_05415 | Not Available | Positive | 1183400 - 1183660 | 9430.85 |
| esct/ysct/hrct family type iii secretion system export apparatus protein | EXX13_05420 | Not Available | Positive | 1183662 - 1184429 | 28208.8 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | EXX13_05425 | Not Available | Positive | 1184438 - 1185550 | 42963.8 |
| invasion protein | EXX13_05430 | Not Available | Negative | 1185622 - 1185915 | 11202.4 |
| luxr family transcriptional regulator | EXX13_05435 | Not Available | Negative | 1185917 - 1186417 | 19143.0 |
| prgh/eprh family type iii secretion apparatus protein | EXX13_05440 | Not Available | Positive | 1186675 - 1187856 | 45164.6 |
| type iii secretion system needle complex protein | EXX13_05445 | Not Available | Positive | 1187870 - 1188109 | 9038.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





