Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | EXX13_05335 | Not Available | Positive | 1169190 - 1170386 | 43390.5 |
| (2e,6e)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase | EXX13_05340 | Not Available | Positive | 1170575 - 1171333 | 28314.5 |
| phosphatidate cytidylyltransferase | EXX13_05345 | Not Available | Positive | 1171346 - 1172203 | 31455.6 |
| sigma e protease regulator rsep | EXX13_05350 | Not Available | Positive | 1172215 - 1173567 | 49074.2 |
| outer membrane protein assembly factor bama | EXX13_05355 | Not Available | Positive | 1173597 - 1175071 | 54647.6 |
| hypothetical protein | EXX13_05365 | Not Available | Negative | 1175968 - 1176159 | 6790.31 |
| hypothetical protein | EXX13_05370 | Not Available | Positive | 1176165 - 1176410 | 8720.51 |
| duf3883 domain-containing protein | EXX13_05375 | Not Available | Positive | 1176461 - 1177597 | 42296.9 |
| is1182-like element iscfr1 family transposase | EXX13_05380 | Not Available | Positive | 1177712 - 1179082 | 52000.2 |
| class a broad-spectrum beta-lactamase tem-1 | EXX13_05385 | Not Available | Positive | 1179903 - 1180763 | 31517.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





