Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carnitine metabolism transcriptional regulator caif | EXX13_04630 | Not Available | Positive | 1009691 - 1010086 | 15437.1 |
| carnitine operon protein caie | EXX13_04635 | Not Available | Negative | 1010205 - 1010795 | 21233.7 |
| carnitinyl-coa dehydratase | EXX13_04640 | Not Available | Negative | 1010801 - 1011586 | 28191.8 |
| crotonobetaine/carnitine-coa ligase | EXX13_04645 | Not Available | Negative | 1011695 - 1013248 | 58520.3 |
| l-carnitine coa-transferase | EXX13_04650 | Not Available | Negative | 1013322 - 1014539 | 45071.2 |
| crotonobetainyl-coa dehydrogenase | EXX13_04655 | Not Available | Negative | 1014668 - 1015810 | 42560.8 |
| l-carnitine/gamma-butyrobetaine antiporter | EXX13_04660 | Not Available | Negative | 1015841 - 1017355 | 56590.4 |
| electron transfer flavoprotein fixa | EXX13_04665 | Not Available | Positive | 1017828 - 1018598 | 27145.2 |
| electron transfer flavoprotein subunit alpha/fixb family protein | EXX13_04670 | Not Available | Positive | 1018613 - 1019554 | 33471.0 |
| fad-dependent oxidoreductase | EXX13_04675 | Not Available | Positive | 1019605 - 1020891 | 45731.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





