Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| patatin family protein | EXX13_04330 | Not Available | Positive | 943109 - 944182 | 39834.1 |
| metal-dependent hydrolase | EXX13_04335 | Not Available | Positive | 944179 - 944961 | 28985.9 |
| yjjw family glycine radical enzyme activase | EXX13_04340 | Not Available | Negative | 945175 - 946038 | 31479.3 |
| yjji family glycine radical enzyme | EXX13_04345 | Not Available | Negative | 946010 - 947560 | 58023.3 |
| deoxyribose-phosphate aldolase | EXX13_04350 | Not Available | Positive | 947818 - 948597 | 27735.3 |
| thymidine phosphorylase | EXX13_04355 | Not Available | Positive | 948724 - 950046 | 47182.9 |
| phosphopentomutase | EXX13_04360 | Not Available | Positive | 950098 - 951321 | 44372.4 |
| purine-nucleoside phosphorylase | EXX13_04365 | Not Available | Positive | 951378 - 952097 | 25951.4 |
| xre family transcriptional regulator | EXX13_04370 | Not Available | Negative | 952181 - 952444 | 10042.5 |
| lipoate--protein ligase lpla | EXX13_04375 | Not Available | Negative | 952476 - 953492 | 37899.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





