Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | EXX13_04110 | Not Available | Negative | 899446 - 900624 | 41308.0 |
| hypothetical protein | EXX13_04115 | Not Available | Negative | 900692 - 901534 | 31489.6 |
| type iii effector | EXX13_04125 | Not Available | Negative | 901803 - 904130 | 87809.6 |
| duf3343 domain-containing protein | EXX13_04130 | Not Available | Negative | 904443 - 904709 | 9891.88 |
| hypothetical protein | EXX13_04135 | Not Available | Negative | 904706 - 905473 | 27302.9 |
| 2-hydroxyacyl-coa dehydratase subunit d | EXX13_04140 | Not Available | Negative | 905483 - 906634 | 42800.4 |
| duf445 domain-containing protein | EXX13_04145 | Not Available | Negative | 906750 - 908030 | 48192.6 |
| multidrug efflux mfs transporter mdtm | EXX13_04150 | Not Available | Negative | 908071 - 909303 | 44582.0 |
| hypothetical protein | EXX13_04155 | Not Available | Negative | 909249 - 909434 | 6959.83 |
| rpn family recombination-promoting nuclease/putative transposase | EXX13_04160 | Not Available | Positive | 909770 - 910714 | 36795.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





