Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_25 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317644 bp
Thymine Count
1318563 bp
Guanine Count
1359669 bp
Cytosine Count
1319404 bp
Genome Length
5315401 bp
Protein-coding Genes
4795 genes
Non-Coding Genes
303 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Transposase is1 | EXX23_00005 | Not Available | Negative | 1 - 71 | 2357.77 |
| Trna-thr; | Not Available | Not Available | Positive | 85 - 160 | Not Available |
| Trna-asp; | Not Available | Not Available | Positive | 124 - 200 | Not Available |
| Trna-ile; | Not Available | Not Available | Positive | 132 - 208 | Not Available |
| Tail fiber assembly protein u | EXX23_00010 | Not Available | Positive | 148 - 675 | 20146.5 |
| Trna-trp; | Not Available | Not Available | Positive | 209 - 284 | Not Available |
| Trna-ala; | Not Available | Not Available | Positive | 251 - 326 | Not Available |
| Hypothetical protein | EXX23_00015 | Not Available | Negative | 827 - 1606 | 30022.2 |
| Trna-thr; | Not Available | Not Available | Positive | 1812 - 1887 | Not Available |
| Phage tail sheath protein fi | EXX23_00020 | Not Available | Positive | 2007 - 3197 | 43150.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Hemorrhagic colitis | Causes | PMC3035056 |
| Early onset neonatal sepsis | Causes | PMC4560869 |
| Renal failure | Causes | PMC4726323 |
| Anemia | Causes | PMC4726323 |
| Hemorrhagic diarrhea | Causes | PMC4726323 |
| Hus | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5995498 |
| Hemolytic uremic syndrome | Causes | PMC5995498 |
| Acute bacterial meningitis | Causes | PMC6306750 |
| Endometritis | Causes | PMC7238638 |





