Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_25 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317644 bp
Thymine Count
1318563 bp
Guanine Count
1359669 bp
Cytosine Count
1319404 bp
Genome Length
5315401 bp
Protein-coding Genes
4795 genes
Non-Coding Genes
303 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c nitrite reductase pentaheme subunit | EXX23_15015 | Not Available | Positive | 3173798 - 3174364 | 20657.6 |
| cytochrome c nitrite reductase fe-s protein | EXX23_15020 | Not Available | Positive | 3174361 - 3175032 | 24568.8 |
| cytochrome c nitrite reductase subunit nrfd | EXX23_15025 | Not Available | Positive | 3175029 - 3175985 | 35044.4 |
| heme lyase ccmf/nrfe family subunit | EXX23_15030 | Not Available | Positive | 3176005 - 3177723 | 63440.1 |
| heme lyase nrfefg subunit nrff | EXX23_15035 | Not Available | Positive | 3177716 - 3178099 | 14595.1 |
| heme lyase nrfefg subunit nrfg | EXX23_15040 | Not Available | Positive | 3178096 - 3178692 | 22773.5 |
| glutamate/aspartate:proton symporter gltp | EXX23_15045 | Not Available | Positive | 3179034 - 3180347 | 47134.0 |
| sel1 repeat family protein | EXX23_15050 | Not Available | Negative | 3180650 - 3181339 | 25080.4 |
| formate dehydrogenase subunit alpha | EXX23_15055 | Not Available | Negative | 3181433 - 3183580 | 79254.2 |
| multidrug efflux transporter outer membrane subunit mdtp | EXX23_15060 | Not Available | Negative | 3183778 - 3185244 | 53346.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





