Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_25 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317644 bp
Thymine Count
1318563 bp
Guanine Count
1359669 bp
Cytosine Count
1319404 bp
Genome Length
5315401 bp
Protein-coding Genes
4795 genes
Non-Coding Genes
303 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide response transcriptional regulator soxs | EXX23_14955 | Not Available | Negative | 3160902 - 3161225 | 12911.6 |
| redox-sensitive transcriptional activator soxr | EXX23_14960 | Not Available | Positive | 3161311 - 3161775 | 17150.7 |
| ncs2 family permease | EXX23_14965 | Not Available | Positive | 3162321 - 3163670 | 45714.4 |
| is200/is605 family transposase | EXX23_14975 | Not Available | Positive | 3163863 - 3164321 | 18001.0 |
| na+/h+ antiporter | EXX23_14985 | Not Available | Positive | 3164532 - 3166181 | 60527.5 |
| pentapeptide repeat-containing protein | EXX23_14990 | Not Available | Negative | 3166335 - 3167627 | 49345.0 |
| cation/acetate symporter actp | EXX23_14995 | Not Available | Negative | 3167805 - 3169454 | 59257.8 |
| duf485 domain-containing protein | EXX23_15000 | Not Available | Negative | 3169451 - 3169765 | 11658.3 |
| acetate--coa ligase | EXX23_15005 | Not Available | Negative | 3169966 - 3171924 | 72099.4 |
| ammonia-forming nitrite reductase cytochrome c552 subunit | EXX23_15010 | Not Available | Positive | 3172317 - 3173753 | 53705.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





