Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_25 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317644 bp
Thymine Count
1318563 bp
Guanine Count
1359669 bp
Cytosine Count
1319404 bp
Genome Length
5315401 bp
Protein-coding Genes
4795 genes
Non-Coding Genes
303 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | EXX23_14535 | Not Available | Negative | 3074004 - 3074483 | 17817.5 |
| polynucleotide adenylyltransferase pcnb | EXX23_14540 | Not Available | Negative | 3074480 - 3075898 | 54659.0 |
| trna glutamyl-q(34) synthetase gluqrs | EXX23_14545 | Not Available | Negative | 3075937 - 3076863 | 34871.6 |
| rna polymerase-binding transcription factor dksa | EXX23_14550 | Not Available | Negative | 3076900 - 3077355 | 17528.7 |
| dna/rna nuclease sfsa | EXX23_14555 | Not Available | Negative | 3077533 - 3078237 | 26177.1 |
| rna 2',3'-cyclic phosphodiesterase | EXX23_14560 | Not Available | Negative | 3078252 - 3078782 | 19980.1 |
| atp-dependent helicase hrpb | EXX23_14565 | Not Available | Positive | 3078856 - 3081285 | 89106.1 |
| bifunctional glycosyl transferase/transpeptidase | EXX23_14570 | Not Available | Positive | 3081418 - 3083952 | 94270.0 |
| ferrichrome porin fhua | EXX23_14575 | Not Available | Positive | 3084172 - 3086415 | 82170.5 |
| fe3+-hydroxamate abc transporter atp-binding protein fhuc | EXX23_14580 | Not Available | Positive | 3086466 - 3087263 | 28886.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





