Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_25 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317644 bp
Thymine Count
1318563 bp
Guanine Count
1359669 bp
Cytosine Count
1319404 bp
Genome Length
5315401 bp
Protein-coding Genes
4795 genes
Non-Coding Genes
303 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-serine/threonine phosphatase | EXX23_14075 | Not Available | Positive | 2977194 - 2977850 | 25124.8 |
| hypothetical protein | EXX23_14080 | Not Available | Negative | 2977891 - 2978127 | 9180.06 |
| ubid family decarboxylase | EXX23_14085 | Not Available | Negative | 2978138 - 2979565 | 52455.9 |
| ubix family flavin prenyltransferase | EXX23_14090 | Not Available | Negative | 2979565 - 2980158 | 21445.2 |
| marr family transcriptional regulator | EXX23_14095 | Not Available | Positive | 2980305 - 2980712 | 15479.8 |
| rna polymerase sigma factor rpos | EXX23_14100 | Not Available | Negative | 2980832 - 2981824 | 37975.1 |
| murein hydrolase activator nlpd | EXX23_14105 | Not Available | Negative | 2981887 - 2983026 | 40151.3 |
| protein-l-isoaspartate o-methyltransferase | EXX23_14110 | Not Available | Negative | 2983166 - 2983792 | 23259.2 |
| 5'/3'-nucleotidase sure | EXX23_14115 | Not Available | Negative | 2983786 - 2984547 | 26902.0 |
| trna pseudouridine(13) synthase trud | EXX23_14120 | Not Available | Negative | 2984528 - 2985577 | 39078.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





