Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_25 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317644 bp
Thymine Count
1318563 bp
Guanine Count
1359669 bp
Cytosine Count
1319404 bp
Genome Length
5315401 bp
Protein-coding Genes
4795 genes
Non-Coding Genes
303 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux mfs transporter periplasmic adaptor subunit emra | EXX23_13825 | Not Available | Positive | 2928817 - 2929989 | 42793.6 |
| multidrug efflux mfs transporter permease subunit emrb | EXX23_13830 | Not Available | Positive | 2930006 - 2931544 | 55627.7 |
| s-ribosylhomocysteine lyase | EXX23_13835 | Not Available | Negative | 2931608 - 2932123 | 19417.3 |
| glutamate--cysteine ligase | EXX23_13840 | Not Available | Negative | 2932273 - 2933829 | 58242.5 |
| deda family protein | EXX23_13845 | Not Available | Negative | 2933902 - 2934330 | 15590.6 |
| fructose-1-phosphate/6-phosphogluconate phosphatase | EXX23_13850 | Not Available | Negative | 2934327 - 2934893 | 20800.1 |
| hypothetical protein | EXX23_13855 | Not Available | Negative | 2934923 - 2935150 | 8668.47 |
| Trna-arg | Not Available | Not Available | Positive | 2935172 - 2935248 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 2935447 - 2935523 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 2935534 - 2935610 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





