Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_25 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317644 bp
Thymine Count
1318563 bp
Guanine Count
1359669 bp
Cytosine Count
1319404 bp
Genome Length
5315401 bp
Protein-coding Genes
4795 genes
Non-Coding Genes
303 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXX23_13675 | Not Available | Positive | 2901637 - 2903889 | 85204.2 |
| carbon starvation induced protein csid | EXX23_13680 | Not Available | Positive | 2904226 - 2905203 | 37323.4 |
| l-2-hydroxyglutarate oxidase | EXX23_13685 | Not Available | Positive | 2905222 - 2906490 | 46014.6 |
| nadp-dependent succinate-semialdehyde dehydrogenase i | EXX23_13690 | Not Available | Positive | 2906513 - 2907961 | 51806.1 |
| 4-aminobutyrate--2-oxoglutarate transaminase | EXX23_13695 | Not Available | Positive | 2907975 - 2909255 | 45647.3 |
| gaba permease | EXX23_13700 | Not Available | Positive | 2909673 - 2911073 | 51069.1 |
| dna-binding transcriptional regulator csir | EXX23_13705 | Not Available | Positive | 2911094 - 2911756 | 24964.3 |
| potassium binding protein kbp | EXX23_13710 | Not Available | Negative | 2911757 - 2912206 | 16036.9 |
| yqae/pmp3 family membrane protein | EXX23_13715 | Not Available | Negative | 2912289 - 2912447 | 5865.57 |
| transcriptional regulator | EXX23_13720 | Not Available | Positive | 2912630 - 2912929 | 10627.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





