Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_25 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317644 bp
Thymine Count
1318563 bp
Guanine Count
1359669 bp
Cytosine Count
1319404 bp
Genome Length
5315401 bp
Protein-coding Genes
4795 genes
Non-Coding Genes
303 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | EXX23_13490 | Not Available | Positive | 2869845 - 2870327 | 17256.5 |
| 50s ribosomal protein l19 | EXX23_13495 | Not Available | Negative | 2870404 - 2870751 | 13134.0 |
| trna (guanosine(37)-n1)-methyltransferase trmd | EXX23_13500 | Not Available | Negative | 2870793 - 2871560 | 28424.0 |
| ribosome maturation factor rimm | EXX23_13505 | Not Available | Negative | 2871591 - 2872139 | 20606.6 |
| 30s ribosomal protein s16 | EXX23_13510 | Not Available | Negative | 2872158 - 2872406 | 9191.08 |
| adhesin-like autotransporter ypja | EXX23_13650 | Not Available | Negative | 2893385 - 2897965 | 157667.0 |
| atpase | EXX23_13655 | Not Available | Negative | 2898030 - 2898149 | 4328.2 |
| dna invertase | EXX23_13660 | Not Available | Negative | 2898304 - 2898522 | 8161.18 |
| hypothetical protein | EXX23_13665 | Not Available | Negative | 2898901 - 2900250 | 50571.6 |
| Trna-met | Not Available | Not Available | Positive | 2901002 - 2901077 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





