Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_25 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317644 bp
Thymine Count
1318563 bp
Guanine Count
1359669 bp
Cytosine Count
1319404 bp
Genome Length
5315401 bp
Protein-coding Genes
4795 genes
Non-Coding Genes
303 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent dna methyltransferase | EXX23_13390 | Not Available | Negative | 2835706 - 2840640 | 189037.0 |
| dead/deah box helicase | EXX23_13395 | Not Available | Negative | 2840643 - 2843501 | 108860.0 |
| dead/deah box helicase | EXX23_13400 | Not Available | Negative | 2843725 - 2850039 | 237147.0 |
| hypothetical protein | EXX23_13405 | Not Available | Negative | 2850039 - 2853353 | 125996.0 |
| hypothetical protein | EXX23_13410 | Not Available | Positive | 2853610 - 2855262 | 61545.2 |
| ompa family protein | EXX23_13415 | Not Available | Positive | 2855269 - 2855976 | 27331.8 |
| hnh endonuclease | EXX23_13420 | Not Available | Positive | 2855980 - 2857083 | 42042.0 |
| n-acetylneuraminate epimerase | EXX23_13425 | Not Available | Positive | 2857313 - 2857567 | 9506.06 |
| atp-dependent chaperone clpb | EXX23_13430 | Not Available | Negative | 2857821 - 2860394 | 95590.8 |
| polyphenol oxidase | EXX23_13435 | Not Available | Negative | 2860524 - 2861255 | 26299.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





