Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_25 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317644 bp
Thymine Count
1318563 bp
Guanine Count
1359669 bp
Cytosine Count
1319404 bp
Genome Length
5315401 bp
Protein-coding Genes
4795 genes
Non-Coding Genes
303 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperone protein fimc | EXX23_13335 | Not Available | Negative | 2817345 - 2818070 | 26630.5 |
| type 1 fimbrial protein | EXX23_13340 | Not Available | Negative | 2818107 - 2818646 | 19344.3 |
| type 1 fimbrial protein subunit fima | EXX23_13345 | Not Available | Negative | 2818711 - 2819259 | 18294.5 |
| tyrosine recombinase | EXX23_13350 | Not Available | Negative | 2819740 - 2820336 | 23102.7 |
| type 1 fimbriae regulatory protein fimb | EXX23_13355 | Not Available | Negative | 2820814 - 2821416 | 22994.8 |
| n-acetylneuraminic acid outer membrane channel protein nanc | EXX23_13360 | Not Available | Positive | 2822873 - 2823589 | 27889.4 |
| yjht family mutarotase | EXX23_13365 | Not Available | Positive | 2823609 - 2824715 | 39576.2 |
| sialate o-acetylesterase | EXX23_13370 | Not Available | Positive | 2824780 - 2825760 | 36712.7 |
| atp-dependent helicase | EXX23_13380 | Not Available | Negative | 2827254 - 2829368 | 79379.9 |
| dead/deah box helicase | EXX23_13385 | Not Available | Negative | 2829365 - 2835706 | 238193.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





