Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_25 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317644 bp
Thymine Count
1318563 bp
Guanine Count
1359669 bp
Cytosine Count
1319404 bp
Genome Length
5315401 bp
Protein-coding Genes
4795 genes
Non-Coding Genes
303 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i restriction endonuclease subunit r | EXX23_13170 | Not Available | Positive | 2778428 - 2781691 | 124855.0 |
| endoribonuclease syme | EXX23_13175 | Not Available | Positive | 2781906 - 2782244 | 12255.7 |
| duf1127 domain-containing protein | EXX23_13180 | Not Available | Negative | 2782286 - 2782450 | 6834.34 |
| plp-dependent aminotransferase family protein | EXX23_13185 | Not Available | Positive | 2782627 - 2784039 | 53067.7 |
| rpn family recombination-promoting nuclease/putative transposase | EXX23_13190 | Not Available | Negative | 2784281 - 2785225 | 36765.3 |
| multidrug efflux mfs transporter mdtm | EXX23_13195 | Not Available | Positive | 2785703 - 2786935 | 44582.0 |
| duf445 domain-containing protein | EXX23_13200 | Not Available | Positive | 2786976 - 2788256 | 48191.6 |
| 2-hydroxyacyl-coa dehydratase subunit d | EXX23_13205 | Not Available | Positive | 2788372 - 2789523 | 42783.4 |
| hypothetical protein | EXX23_13210 | Not Available | Positive | 2789533 - 2790300 | 27158.7 |
| duf3343 domain-containing protein | EXX23_13215 | Not Available | Positive | 2790297 - 2790563 | 9907.93 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





