Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_25 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317644 bp
Thymine Count
1318563 bp
Guanine Count
1359669 bp
Cytosine Count
1319404 bp
Genome Length
5315401 bp
Protein-coding Genes
4795 genes
Non-Coding Genes
303 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | EXX23_13120 | Not Available | Negative | 2767209 - 2768873 | 59813.9 |
| hypothetical protein | EXX23_13125 | Not Available | Positive | 2769103 - 2769645 | 21615.1 |
| carbon starvation protein a | EXX23_13130 | Not Available | Positive | 2769938 - 2772088 | 77314.5 |
| ybdd/yjix family protein | EXX23_13135 | Not Available | Positive | 2772138 - 2772341 | 7729.24 |
| gtpase | EXX23_13140 | Not Available | Positive | 2772352 - 2773308 | 35694.9 |
| toxin-antitoxin system, antitoxin component | EXX23_13145 | Not Available | Negative | 2773342 - 2773644 | 11502.6 |
| brnt family toxin | EXX23_13150 | Not Available | Negative | 2773631 - 2773918 | 11157.3 |
| restriction endonuclease | EXX23_13155 | Not Available | Positive | 2774115 - 2775281 | 44317.1 |
| dna methyltransferase | EXX23_13160 | Not Available | Positive | 2775345 - 2776964 | 60653.0 |
| restriction endonuclease subunit s | EXX23_13165 | Not Available | Positive | 2776954 - 2778333 | 51468.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





