Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_25 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317644 bp
Thymine Count
1318563 bp
Guanine Count
1359669 bp
Cytosine Count
1319404 bp
Genome Length
5315401 bp
Protein-coding Genes
4795 genes
Non-Coding Genes
303 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase flavoprotein subunit | EXX23_12605 | Not Available | Positive | 2664204 - 2665970 | 64425.6 |
| succinate dehydrogenase iron-sulfur subunit | EXX23_12610 | Not Available | Positive | 2665986 - 2666702 | 26843.4 |
| 2-oxoglutarate dehydrogenase e1 component | EXX23_12615 | Not Available | Positive | 2667003 - 2669804 | 105068.0 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | EXX23_12620 | Not Available | Positive | 2669819 - 2671036 | 44014.0 |
| adp-forming succinate--coa ligase subunit beta | EXX23_12625 | Not Available | Positive | 2671402 - 2672568 | 41395.1 |
| succinate--coa ligase subunit alpha | EXX23_12630 | Not Available | Positive | 2672568 - 2673437 | 29779.3 |
| hypothetical protein | EXX23_12635 | Not Available | Negative | 2673542 - 2673727 | 6606.09 |
| histidine ammonia-lyase | EXX23_12640 | Not Available | Positive | 2673687 - 2673833 | 5369.52 |
| lysr family transcriptional regulator | EXX23_12645 | Not Available | Positive | 2674104 - 2675009 | 34349.4 |
| class i fumarate hydratase | EXX23_12655 | Not Available | Negative | 2675655 - 2677307 | 60060.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





