Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_25 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317644 bp
Thymine Count
1318563 bp
Guanine Count
1359669 bp
Cytosine Count
1319404 bp
Genome Length
5315401 bp
Protein-coding Genes
4795 genes
Non-Coding Genes
303 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | EXX23_11630 | Not Available | Negative | 2454437 - 2456251 | 69810.8 |
| cyclic di-gmp phosphodiesterase | EXX23_11635 | Not Available | Negative | 2456333 - 2457889 | 58545.4 |
| bifunctional murein dd-endopeptidase/murein ld-carboxypeptidase | EXX23_11640 | Not Available | Negative | 2458070 - 2458636 | 21041.1 |
| kdo(2)-lipid a phosphotransferase | EXX23_11645 | Not Available | Negative | 2459048 - 2459761 | 26776.7 |
| gtp-binding protein | EXX23_11650 | Not Available | Negative | 2459800 - 2460786 | 36059.3 |
| mannitol dehydrogenase family protein | EXX23_11655 | Not Available | Negative | 2460904 - 2462370 | 53961.8 |
| elongation factor p-like protein yeip | EXX23_11660 | Not Available | Negative | 2462593 - 2463165 | 21533.9 |
| ykgj family cysteine cluster protein | EXX23_11665 | Not Available | Positive | 2463320 - 2463574 | 8954.96 |
| sugar efflux transporter setb | EXX23_11670 | Not Available | Negative | 2463571 - 2464752 | 42678.5 |
| fused pts fructose transporter subunit iia/hpr protein | EXX23_11675 | Not Available | Positive | 2465120 - 2466250 | 39650.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





