Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_25 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317644 bp
Thymine Count
1318563 bp
Guanine Count
1359669 bp
Cytosine Count
1319404 bp
Genome Length
5315401 bp
Protein-coding Genes
4795 genes
Non-Coding Genes
303 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ecotin | EXX23_11480 | Not Available | Negative | 2425421 - 2425909 | 18166.0 |
| ferredoxin-type protein napf | EXX23_11485 | Not Available | Positive | 2426316 - 2426810 | 18048.3 |
| chaperone napd | EXX23_11490 | Not Available | Positive | 2426800 - 2427063 | 9469.03 |
| periplasmic nitrate reductase subunit alpha | EXX23_11495 | Not Available | Positive | 2427060 - 2429546 | 93062.0 |
| ferredoxin-type protein napg | EXX23_11500 | Not Available | Positive | 2429553 - 2430248 | 24926.1 |
| quinol dehydrogenase ferredoxin subunit naph | EXX23_11505 | Not Available | Positive | 2430235 - 2431098 | 31861.3 |
| nitrate reductase cytochrome c-type subunit | EXX23_11510 | Not Available | Positive | 2431095 - 2431544 | 16297.4 |
| cytochrome c-type protein napc | EXX23_11515 | Not Available | Positive | 2431554 - 2432156 | 23089.8 |
| cytochrome c biogenesis heme-transporting atpase ccma | EXX23_11520 | Not Available | Positive | 2432175 - 2432792 | 22866.4 |
| heme exporter protein ccmb | EXX23_11525 | Not Available | Positive | 2432789 - 2433451 | 23620.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





