Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_25 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317644 bp
Thymine Count
1318563 bp
Guanine Count
1359669 bp
Cytosine Count
1319404 bp
Genome Length
5315401 bp
Protein-coding Genes
4795 genes
Non-Coding Genes
303 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase | EXX23_11325 | Not Available | Positive | 2375534 - 2376610 | 40830.5 |
| hypothetical protein | EXX23_11330 | Not Available | Negative | 2376834 - 2377904 | 41459.9 |
| lysr family transcriptional regulator | EXX23_11335 | Not Available | Negative | 2378368 - 2379246 | 32670.1 |
| mfs transporter | EXX23_11340 | Not Available | Positive | 2379398 - 2380588 | 42908.2 |
| lipopolysaccharide kinase inaa | EXX23_11345 | Not Available | Positive | 2380669 - 2381319 | 25285.5 |
| ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein yfae | EXX23_11350 | Not Available | Negative | 2381373 - 2381627 | 9287.31 |
| ribonucleoside-diphosphate reductase 1 subunit beta | EXX23_11355 | Not Available | Negative | 2381627 - 2382757 | 43519.6 |
| ribonucleoside-diphosphate reductase subunit alpha | EXX23_11360 | Not Available | Negative | 2382991 - 2385276 | 85722.9 |
| aida-i family autotransporter yfal | EXX23_11365 | Not Available | Positive | 2385972 - 2389724 | 131340.0 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | EXX23_11370 | Not Available | Negative | 2389865 - 2390587 | 26583.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





