Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_25 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317644 bp
Thymine Count
1318563 bp
Guanine Count
1359669 bp
Cytosine Count
1319404 bp
Genome Length
5315401 bp
Protein-coding Genes
4795 genes
Non-Coding Genes
303 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycolate permease glca | EXX23_11060 | Not Available | Positive | 2313205 - 2314887 | 58923.7 |
| duf4092 domain-containing protein | EXX23_11065 | Not Available | Positive | 2315372 - 2319925 | 167306.0 |
| prepilin peptidase | EXX23_11075 | Not Available | Positive | 2320252 - 2321061 | 29540.0 |
| hypothetical protein | EXX23_11080 | Not Available | Positive | 2321127 - 2321537 | 14640.8 |
| type ii secretion system protein gspc | EXX23_11085 | Not Available | Positive | 2321555 - 2322514 | 35721.2 |
| type ii secretion system protein gspd | EXX23_11090 | Not Available | Positive | 2322544 - 2324604 | 74234.1 |
| type ii secretion system protein gspe | EXX23_11095 | Not Available | Positive | 2324604 - 2326097 | 55195.7 |
| type ii secretion system protein gspf | EXX23_11100 | Not Available | Positive | 2326097 - 2327320 | 44997.9 |
| type ii secretion system protein gspg | EXX23_11105 | Not Available | Positive | 2327337 - 2327792 | 16663.8 |
| type ii secretion system protein gsph | EXX23_11110 | Not Available | Positive | 2327796 - 2328359 | 21173.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





