Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_25 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317644 bp
Thymine Count
1318563 bp
Guanine Count
1359669 bp
Cytosine Count
1319404 bp
Genome Length
5315401 bp
Protein-coding Genes
4795 genes
Non-Coding Genes
303 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inorganic phosphate transporter pitb | EXX23_10960 | Not Available | Positive | 2290848 - 2292347 | 53872.2 |
| thymidylate kinase | EXX23_10965 | Not Available | Negative | 2292396 - 2293088 | 25417.2 |
| thymidylate kinase | EXX23_10970 | Not Available | Positive | 2293262 - 2293975 | 26394.3 |
| hypothetical protein | EXX23_10975 | Not Available | Positive | 2294007 - 2294765 | 28125.2 |
| lipopolysaccharide biosynthesis protein | EXX23_10980 | Not Available | Positive | 2294811 - 2296160 | 48633.0 |
| hypothetical protein | EXX23_10985 | Not Available | Positive | 2296160 - 2296984 | 32061.7 |
| ytfj family protein | EXX23_10990 | Not Available | Positive | 2296996 - 2297556 | 20716.1 |
| lps export abc transporter permease lptf | EXX23_10995 | Not Available | Positive | 2297587 - 2298657 | 39938.2 |
| lps export abc transporter permease lptg | EXX23_11000 | Not Available | Positive | 2298654 - 2299733 | 39758.4 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EXX23_11005 | Not Available | Negative | 2299768 - 2300940 | 41681.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





